IchDB | Ichthyophthirius Genome Database Wiki

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Recent Papers

Huang K, Wang R, Hu G, Zhou W, Li W, Zou H, Wang G, Li M (2024) Immune response of Rhinogobio ventralis to Ichthyophthirius multifiliis infection: Insights from histopathological and real-time gene expression analyses. Fish & shellfish immunology 153:109801
PUBMED:39096983

Qu SY, Liu YH, Liu JT, Li PF, Liu TQ, Wang GX, Yu Q, Ling F (2024) Catechol compounds as dual-targeting agents for fish protection against Ichthyophthirius multifiliis infections. Fish & shellfish immunology :109717
PUBMED:38914179

Meira CM, Carriero MM, Pereira NL, Rihs PGM, Lázaro TM, Rocha NRA, Maia AAM (2024) Immunological effects of DNA vaccination and interleukin utilization as an adjuvant in Astyanax lacustris immunized against Ichthyophthirius multifiliis. Journal of fish diseases :e13979
PUBMED:38879867

BLAST Server at IchDB

Click here for information about the BLAST process and help with advanced options.

BLAST Program

blastn - DNA query to DNA database
blastp - Protein query to protein database
blastx - Translated (6 frames) DNA query to protein database
tblastx - Translated (6 frames) DNA query to translated (6 frames) DNA database
tblastn - Protein query to DNA (6 frames) DNA database

Database

I. Multifiliis Amino Acid (protein)
I. Multifiliis CDS (nucleotide)
I. Multifiliis Assembly (nucleotide)

Query Sequence Enter sequence below in FASTA format

Or load it from disk:
Set subsequence from to

Advanced Options

Filter for low copmlexity regions

Perform ungapped alignment

Expect
Matrix
Alignments

Query Genetic Codes (blastx only)
Database Genetic Codes (tblast[nx] only)

Other advanced options:

Wiki Links

External Links

Ciliate Genomics Consortium
Ichthyophthirius Wikipedia Page

Permission to use the information contained in this database was given by the researchers/institutes who contributed or published the information. Users of the database are solely responsible for compliance with any copyright restrictions, including those applying to the author abstracts. Documents from this server are provided "AS-IS" without any warranty, expressed or implied. The Ciliate.org project at Bradley University is supported by a grant from the National Center for Research Resources, part of the US National Institutes of Health.